Don't get discouraged - this type of problem is easy to diagnose.
Since the engine runs fine when supplied with an external fuel source (to the pump suction), you can pretty much eliminate everything except:
1. The tank-to-pump fuel line restriction (or possibly an air leak)
2. The sender unit (i.e. the pickup filter being fouled to the point fuel flow is reduced)
3. A heavily contaminated tank bottom (so much that the debris is blocking the pickup)
4. Some kind of flow restriction in the "decomissioned' tank transfer valve
The first thing I would do is, disconnect the fuel line at the fuel pump inlet. Connect a compressed air supply to the rubber hose. Like in this area:
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Do it safely - keep the pressure under 20 psi, be sure the gas cap is off the tank (both tanks actually), don't smoke, etc.
While someone applies air pressure at the fuel pump end of the line, you should be at the open tank fill pipe. Listen for vigorous bubbling inside the tank, put your palm over the fill pipe and feel for air flow out of the tank, etc.
Do anything you can do to confirm that there is (or is not) a steady flow of air all the way from the fuel pump, through the suction line, transfer valve, tank outlet line and finally out of the sender filter and into the gasoline.
While all this is going on someone should be tracing the fuel line - following the same route that the test air is taking. They should be watching for any gas - that may have been still in the line - dripping out. They should be listening too - for any sign of the test air leaking out of the lines. A squirt bottle of soap suds would be a good idea.
If you get plenty of flow out of the fill pipe, it most likely means one of two things:
1. That the problem is not a restriction to flow, but rather an air leak into the gas supply. I have been keeping this statement in the back of my mind:
I have a clear filter on it. When cold and warming up, you can see the filter is full of fuel. After about 20 minutes, it isn't empty, but close and you can see the fuel pumping in to it.
That is not always a sure indication of air ingress but it can be.
The second explanation - the good one - is that there
was some kind of obstruction in the fuel supply to the suction side of the pump, but it was blown out when the compressed air was initially applied. If that is the case, button everything up and give the boy his truck back.
What if you get no evidence of air flow from the tank fill pipe when compressed air is applied at the fuel pump end of the line?
Kink in the steel tubing part of the fuel line
Some kind of mechanical failure within the dormant tank transfer valve
A seriously broken hose or piece of tubing in the line (you'd hear it when the air was on)
IDK...that's all I can think of. If it isn't one of those, maybe the truck is haunted.